CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Thermoanaerobacterium xylanolyticum LX-11
 

Thermoanaerobacterium xylanolyticum LX-11

Genome
 

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Total size (bp) 2534358
G + C content (%) 34.98
Coding sequences 2345
Coding density (%) 87.48
Average gene length (bp) 945
Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 52
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
14 14 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (19 + 0) - Phylogenetic Tree - Data Heatmap
Classic CheA Classic CheA
Histidine Kinase, Classic 17
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (26) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family AmiR_NasR Family PleD Family CheY Family unclassified Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 1
NtrC 0OmpR 11PglZ 0PilB 0PleD 3
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 1
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 28 April 2024, 0:35:54 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales