CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Thermodesulfobacterium sp. OPB45
 

Thermodesulfobacterium sp. OPB45

Genome
 

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Total size (bp) 1634377
G + C content (%) 30.58
Coding sequences 1596
Coding density (%) 93.36
Average gene length (bp) 956
Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 40
Max spacer hisKA - HATPase domains 52
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
12 5 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (8 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 6
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (14) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family CheB Family RpfG Family PleD Family CheY Family NtrC Family OmpR Family CheB Family RpfG Family PleD Family CheY Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 0
NtrC 5OmpR 1PglZ 0PilB 0PleD 3
PleD_VieA 0PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 20 April 2024, 4:45:21 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales