CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Teredinibacter turnerae T7901
 

Teredinibacter turnerae T7901

Genome
 

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Total size (bp) 5193164
G + C content (%) 50.89
Coding sequences 4254
Coding density (%) 86.47
Average gene length (bp) 1056
Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 131
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
56 25 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (52 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 32
Histidine Kinase, Hybrid 14
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (57) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family CheV Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family VieB Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family CheV Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family VieB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 4
CheC 0CheV 1CheY 10CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 3MerR 0NarL 5
NtrC 5OmpR 10PglZ 0PilB 0PleD 2
PleD_VieA 3PrrA 1RpfG 0RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 1VieB 1WcaA 0
Xre 0YcbB 0YesN 0unclassified 9
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 1
Hpt 2

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Date : 27 April 2024, 21:13:59 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales