CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Terriglobus roseus DSM 18391
 

Terriglobus roseus DSM 18391

Genome
 

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Total size (bp) 5227858
G + C content (%) 60.28
Coding sequences 4245
Coding density (%) 87.94
Average gene length (bp) 1083
Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 17
Max spacer hisKA - HATPase domains 59
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
48 31 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (53 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 49
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (59) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family PleD_VieA Family PleD Family CheY Family TrxB Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family PleD_VieA Family PleD Family CheY Family TrxB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 12CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 11
NtrC 12OmpR 15PglZ 0PilB 0PleD 1
PleD_VieA 1PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 27 April 2024, 15:58:17 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales