CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database
 

Termite Gut

Metagenome
 
Total size (bp) 61533145
G + C content (%) 48.21
Coding sequences
Coding density (%) 0
Average gene length (bp) 0

Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 12
Max spacer hisKA - HATPase domains 118
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (331 + 140)
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 239
Histidine Kinase, Hybrid 78
Histidine Kinase, Unorthodox 12
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 140
P2CS Predicted Response Regulators (969)
NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD Family CheY Family FrzZ Family PglZ Family VieB Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD Family CheY Family FrzZ Family PglZ Family VieB Family unclassified Family
AlpA 0AmiR_NasR 7ArsR 0BetR 0CheB 10
CheC 0CheV 7CheY 316CitT 0CsrA 0
CyC-C 3FrzZ 54HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 4MerR 0NarL 16
NtrC 4OmpR 22PglZ 1PilB 0PleD 10
PleD_VieA 0PrrA 0RpfG 46RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 1WcaA 0
Xre 0YcbB 0YesN 0unclassified 468
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(260)
HisKa 129
Hpt 131

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