CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Synechococcus sp. PCC 7002
 

Synechococcus sp. PCC 7002

Genome
 

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Total size (bp) 3008047
G + C content (%) 49.63
Coding sequences 2824
Coding density (%) 87.96
Average gene length (bp) 937
Histidine domain Logo
Mean spacer hisKA - HATPase domains 56
Min spacer hisKA - HATPase domains 42
Max spacer hisKA - HATPase domains 141
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
62 3 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (31 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 11
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (34) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family YesN Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family OmpR Family NarL Family YesN Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 4
NtrC 0OmpR 9PglZ 0PilB 0PleD 1
PleD_VieA 3PrrA 0RpfG 0RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 8
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 1
Hpt 2

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Date : 27 April 2024, 16:42:02 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales