CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Synechococcus elongatus PCC 7942
 

Synechococcus elongatus PCC 7942

Genome
 

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Total size (bp) 2695903
G + C content (%) 55.47
Coding sequences 2612
Coding density (%) 89.03
Average gene length (bp) 919
Histidine domain Logo
Mean spacer hisKA - HATPase domains 62
Min spacer hisKA - HATPase domains 43
Max spacer hisKA - HATPase domains 145
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
27 3 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (14 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 10
Histidine Kinase, Hybrid 2
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (20) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family PleD_VieA Family CheY Family unclassified Family OmpR Family NarL Family PleD_VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 0OmpR 10PglZ 0PilB 0PleD 0
PleD_VieA 1PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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Date : 23 April 2024, 9:14:43 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales