CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Symbiobacterium thermophilum IAM 14863
 

Symbiobacterium thermophilum IAM 14863

Genome
 

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Total size (bp) 3566135
G + C content (%) 68.67
Coding sequences 3337
Coding density (%) 87.21
Average gene length (bp) 932
Histidine domain Logo
Mean spacer hisKA - HATPase domains 52
Min spacer hisKA - HATPase domains 18
Max spacer hisKA - HATPase domains 324
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
14 25 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (28 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 26
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (35) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family CheB Family AmiR_NasR Family PleD Family CheY Family NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family CheB Family AmiR_NasR Family PleD Family CheY Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 11
NtrC 2OmpR 10PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 2TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 27 April 2024, 17:35:24 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales