CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Sulfurimonas denitrificans DSM 1251
 

Sulfurimonas denitrificans DSM 1251

Genome
 

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Total size (bp) 2201561
G + C content (%) 34.46
Coding sequences 2096
Coding density (%) 92.89
Average gene length (bp) 976
Histidine domain Logo
Mean spacer hisKA - HATPase domains 38
Min spacer hisKA - HATPase domains 14
Max spacer hisKA - HATPase domains 58
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
28 23 1 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (39 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 28
Histidine Kinase, Hybrid 7
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (45) - Phylogenetic Tree - Data Heatmap
OmpR Family LytTR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family unclassified Family OmpR Family LytTR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 2CheY 10CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 0
NtrC 0OmpR 19PglZ 0PilB 0PleD 2
PleD_VieA 1PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 8
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 27 April 2024, 20:37:12 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales