CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Sulfuricella denitrificans skB26
 

Sulfuricella denitrificans skB26

Genome
 

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Total size (bp) 3130594
G + C content (%) 56.1
Coding sequences 2982
Coding density (%) 90.51
Average gene length (bp) 950
Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 38
Max spacer hisKA - HATPase domains 132
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
23 24 5 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (36 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 28
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (51) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family PilB Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family PilB Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 2CheY 8CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 6
NtrC 6OmpR 11PglZ 0PilB 1PleD 1
PleD_VieA 7PrrA 1RpfG 2RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 2
Hpt 1

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Date : 27 April 2024, 18:24:03 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales