CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Streptomyces flavogriseus ATCC 33331
 

Streptomyces flavogriseus ATCC 33331

Genome
 

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Total size (bp) 7337497
G + C content (%) 71.14
Coding sequences 6298
Coding density (%) 87.42
Average gene length (bp) 1019
Histidine domain Logo
Mean spacer hisKA - HATPase domains 32
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 67
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
38 47 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (74 + 3) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 72
Histidine Kinase, Hybrid 2
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 3
P2CS Predicted Response Regulators (64) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family RsbU Family AmiR_NasR Family CheY Family unclassified Family OmpR Family NarL Family LytTR Family RsbU Family AmiR_NasR Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 33
NtrC 0OmpR 18PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 6
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 27 April 2024, 17:20:35 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales