CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Streptomyces bingchenggensis BCW-1
 

Streptomyces bingchenggensis BCW-1

Genome
 

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Total size (bp) 11936683
G + C content (%) 70.76
Coding sequences 10022
Coding density (%) 86.56
Average gene length (bp) 1031
Histidine domain Logo
Mean spacer hisKA - HATPase domains 38
Min spacer hisKA - HATPase domains 24
Max spacer hisKA - HATPase domains 405
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
63 87 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (125 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 121
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (117) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family RsbU Family AmiR_NasR Family CitT Family CheY Family TrxB Family IclR Family unclassified Family OmpR Family NarL Family RsbU Family AmiR_NasR Family CitT Family CheY Family TrxB Family IclR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 2CitT 1CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 2
LmbE 0LysR 0LytTR 0MerR 0NarL 66
NtrC 0OmpR 35PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 8
misPredicted TCS proteins (8)
misPredicted Histidine Kinase 2
misPredicted Response Regulator 5
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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Date : 28 April 2024, 1:53:28 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales