CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Stanieria cyanosphaera PCC 7437
 

Stanieria cyanosphaera PCC 7437

Genome
 

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Total size (bp) 5041209
G + C content (%) 35.96
Coding sequences 4328
Coding density (%) 82.13
Average gene length (bp) 957
Histidine domain Logo
Mean spacer hisKA - HATPase domains 58
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 175
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
116 13 10 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (72 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 43
Histidine Kinase, Hybrid 22
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 7
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (97) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family OmpR Family NarL Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 32CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 8
NtrC 0OmpR 19PglZ 0PilB 0PleD 3
PleD_VieA 6PrrA 0RpfG 1RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 26
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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Date : 28 April 2024, 0:42:18 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales