CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Spirochaeta thermophila DSM 6192
 

Spirochaeta thermophila DSM 6192

Genome
 

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Total size (bp) 2472645
G + C content (%) 61.88
Coding sequences 2203
Coding density (%) 94.04
Average gene length (bp) 1055
Histidine domain Logo
Mean spacer hisKA - HATPase domains 34
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 115
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
32 11 0 0 0
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TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (25 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 13
Histidine Kinase, Hybrid 7
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (28) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family YesN Family CheB Family PleD_VieA Family CheY Family FrzZ Family unclassified Family NtrC Family OmpR Family YesN Family CheB Family PleD_VieA Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 10CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 0
NtrC 6OmpR 2PglZ 0PilB 0PleD 0
PleD_VieA 1PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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Date : 27 April 2024, 23:38:49 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales