CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Spirochaeta caldaria DSM 7334
 

Spirochaeta caldaria DSM 7334

Genome
 

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Total size (bp) 3239340
G + C content (%) 45.57
Coding sequences 2789
Coding density (%) 91.19
Average gene length (bp) 1059
Histidine domain Logo
Mean spacer hisKA - HATPase domains 33
Min spacer hisKA - HATPase domains 8
Max spacer hisKA - HATPase domains 131
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
43 25 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (49 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 40
Histidine Kinase, Hybrid 5
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (44) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family YesN Family CheB Family RsbU Family PleD_VieA Family PleD Family CheY Family FrzZ Family unclassified Family NtrC Family OmpR Family NarL Family YesN Family CheB Family RsbU Family PleD_VieA Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 8CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 6
NtrC 5OmpR 4PglZ 0PilB 0PleD 1
PleD_VieA 1PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 7unclassified 7
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 28 April 2024, 0:12:04 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales