CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Spirochaeta africana DSM 8902
 

Spirochaeta africana DSM 8902

Genome
 

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Total size (bp) 3285855
G + C content (%) 57.77
Coding sequences 2782
Coding density (%) 93.45
Average gene length (bp) 1104
Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 14
Max spacer hisKA - HATPase domains 115
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
65 17 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (61 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 39
Histidine Kinase, Hybrid 12
Histidine Kinase, Unorthodox 6
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (39) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family YesN Family CheB Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family NtrC Family OmpR Family NarL Family YesN Family CheB Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 17CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 2
NtrC 4OmpR 3PglZ 0PilB 0PleD 2
PleD_VieA 3PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 0
Hpt 2

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Date : 28 April 2024, 0:34:23 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales