CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Singulisphaera acidiphila DSM 18658
 

Singulisphaera acidiphila DSM 18658

Genome
 

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Total size (bp) 9629675
G + C content (%) 62.26
Coding sequences 7136
Coding density (%) 81.79
Average gene length (bp) 1104
Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 17
Max spacer hisKA - HATPase domains 113
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
72 27 2 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (69 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 35
Histidine Kinase, Hybrid 23
Histidine Kinase, Unorthodox 6
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (67) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family RsbU Family AmiR_NasR Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family RsbU Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 4
CheC 0CheV 0CheY 16CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 4
NtrC 16OmpR 7PglZ 0PilB 0PleD 3
PleD_VieA 0PrrA 0RpfG 1RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 10
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 27 April 2024, 19:00:28 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales