Selenomonas ruminantium subsp. lactilytica TAM6421

Genome   Enlarge Image - Zoomable Map Total size (bp) 3003680 G + C content (%) 50.68 Coding sequences 2826 Coding density (%) 89.51 Average gene length (bp) 951 Histidine domain Logo Mean spacer hisKA - HATPase domains 34 Min spacer hisKA - HATPase domains 14 Max spacer hisKA - HATPase domains 52 Quick Search Gene list (separated by carriage return) Locus-tag Gene name GI Domain description 2CSK_N AAA AAA_3 AAA_5 ACT Ada_Zn_bindi AlkA_N Aminotran_1_ ANTAR AP2 AraC_binding Arc Arch_ATPase Arg_represso AsnC_trans_r Autoind_bind B12-binding BetR BLUF BTAD Cache_1 Cache_2 CBS CHASE CHASE2 CHASE3 CHASE4 CheB_methyle CheC CheD CheR CheR_N CheW CheZ Citrate_synt cNMP cNMP_binding CodY ComK Crl Crp CSD CsrA CtsR Cyanate_lyas CYCc DeoR Diacid_rec DJ-1_PfpI DUF1 DUF2 DUF24 DUF387 EAL EPSP_synthas ExsB FeoA Fer4 FeS Fe_dep_repre Fe_dep_repr_ FHA FlhC FlhD FmdA_AmdA FUR GAF GATase_2 GerE GGDEF Glucokinase Glycos_trans Glyoxalase GntR GreA_GreB GSPII_E GSPII_E_N Guanylate_cy GutM H-kinase_dim HalX HAMP HATPase_c HD HDOD HEAT_PBS HEM4 Hemerythrin HhH-GPD HisKA HisKA_2 HisKA_3 Histone_HNS His_kinase HMA HNOB Hpt HrcA HTH_1 HTH_10 HTH_11 HTH_12 HTH_3 HTH_5 HTH_6 HTH_7 HTH_8 HTH_AraC HTH_CodY HTH_DeoR HTH_DTXR HTH_IclR HTH_LUXR HTH_Mga HTH_XRE HutP HWE_HK IclR Kdo LacI LexA_DNA_bin LysR_substra LytR_cpsA_ps LytTR MA MarR MASE1 MASE2 MCPsignal MecA MerR MerR-DNA-bin MetJ MeTrc Mga MHYT MtlR NIR_SIR NIR_SIR_ferr NIT Nitroreducta Nitro_FeMo-C NTP_transf_2 NUDIX PAC PadR PALP PAS PAS_2 PAS_3 PAS_4 PBPb Pencillinase Peptidase_M2 Peripla_BP_1 Peripla_BP_2 peroxidase PfkB PglZ Phage_AlpA PhoU Phytochrome PIG-L PilZ Pkinase Pkinase_Tyr PP2C_SIG PRD Pribosyltran PrpR_N PTS-HPr PTS_EIIC PucR PuR_N Put_DNA-bind Pyr_redox REC Response_reg Rhodanese ROK ROS_MUCR Rrf2 RseA_N RtcR SBP_bac_1 SBP_bac_3 SBP_bac_5 SBP_bac_7 SBP_bac_9 SfsA Sigma54_DBD Sigma70_r2 Sigma70_r4 SinI SIS SKI Spo0A_C SpoIIE SpoVT_AbrB STAS Sugar-bind S_TKc TetR_C TetR_N TipAS TOBE TPR_1 TPR_2 TPR_3 TPR_4 Trans_reg_C TrkA_C TrmB TrpBP Trp_represso TyrKc UTRA V4R Whib XylR_N YcbB Cross-talk TCS Organization Orphan Pair Triad Tetrad Pentad+ 21 10 1 0 0 Partnership View

TCSs export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta) P2CS Predicted Histidine Kinases (20 + 0) - Phylogenetic Tree - Data Heatmap Histidine Kinase, Classic 14 Histidine Kinase, Hybrid 3 Histidine Kinase, Unorthodox 2 Histidine Kinase, CheA 1 Possible incomplete Histidine Kinase 0 P2CS Predicted Response Regulators (23) - Phylogenetic Tree - Data Heatmap AlpA 0 AmiR_NasR 1 ArsR 0 BetR 0 CheB 2 CheC 0 CheV 1 CheY 4 CitT 0 CsrA 0 CyC-C 0 FrzZ 0 HalX 0 HxlR 0 IclR 0 LmbE 0 LysR 0 LytTR 0 MerR 0 NarL 2 NtrC 0 OmpR 3 PglZ 0 PilB 0 PleD 1 PleD_VieA 1 PrrA 0 RpfG 2 RsbU 0 Sarp 0 Spo0A 0 TrxB 0 VieA 0 VieB 0 WcaA 0 Xre 0 YcbB 1 YesN 1 unclassified 4 misPredicted TCS proteins (0) misPredicted Histidine Kinase 0 misPredicted Response Regulator 0 misPredicted Phosphotransfer Protein 0 Phosphotransfer Proteins(1) HisKa 0 Hpt 1