CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Sanguibacter keddieii DSM 10542
 

Sanguibacter keddieii DSM 10542

Genome
 

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Total size (bp) 4253413
G + C content (%) 71.88
Coding sequences 3710
Coding density (%) 90.13
Average gene length (bp) 1033
Histidine domain Logo
Mean spacer hisKA - HATPase domains 45
Min spacer hisKA - HATPase domains 34
Max spacer hisKA - HATPase domains 77
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
16 30 1 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (41 + 0) - Phylogenetic Tree - Data Heatmap
Classic CheA Classic CheA
Histidine Kinase, Classic 40
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (42) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family CheB Family RsbU Family AmiR_NasR Family CheY Family LmbE Family OmpR Family NarL Family LytTR Family CheB Family RsbU Family AmiR_NasR Family CheY Family LmbE Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 1LysR 0LytTR 1MerR 0NarL 19
NtrC 0OmpR 14PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 28 April 2024, 0:29:25 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales