CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Rubrivivax gelatinosus IL144
 

Rubrivivax gelatinosus IL144

Genome
 

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Total size (bp) 5043253
G + C content (%) 71.25
Coding sequences 4693
Coding density (%) 93.02
Average gene length (bp) 1000
Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 2
Max spacer hisKA - HATPase domains 132
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
68 44 3 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (92 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 53
Histidine Kinase, Hybrid 25
Histidine Kinase, Unorthodox 11
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (72) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family AmiR_NasR Family PleD_VieA Family VieA Family CheY Family MerR Family IclR Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family AmiR_NasR Family PleD_VieA Family VieA Family CheY Family MerR Family IclR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 16CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 7MerR 2NarL 12
NtrC 6OmpR 17PglZ 0PilB 0PleD 0
PleD_VieA 1PrrA 1RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 27 April 2024, 16:09:14 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales