CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Rhodanobacter sp. 2APBS1
 

Rhodanobacter sp. 2APBS1

Genome
 

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Total size (bp) 4225490
G + C content (%) 67.45
Coding sequences 3824
Coding density (%) 89.56
Average gene length (bp) 990
Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 9
Max spacer hisKA - HATPase domains 136
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
25 22 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (32 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 22
Histidine Kinase, Hybrid 7
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (38) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family CheV Family PleD Family CheY Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family CheV Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 1CheY 8CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 6
NtrC 4OmpR 11PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 1RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 27 April 2024, 19:35:49 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales