CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Rhodopseudomonas palustris BisA53
 

Rhodopseudomonas palustris BisA53

Genome
 

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Total size (bp) 5505494
G + C content (%) 64.44
Coding sequences 4878
Coding density (%) 85.82
Average gene length (bp) 969
Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 19
Max spacer hisKA - HATPase domains 60
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
67 21 4 1 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (64 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 38
Histidine Kinase, Hybrid 19
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (60) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RsbU Family AmiR_NasR Family PleD Family VieA Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RsbU Family AmiR_NasR Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 4
CheC 0CheV 0CheY 17CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 10
NtrC 5OmpR 17PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 1RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(6)
HisKa 3
Hpt 3

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Date : 28 April 2024, 0:19:21 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales