CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Rhodopseudomonas palustris CGA009
 

Rhodopseudomonas palustris CGA009

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 5459213
G + C content (%) 65.04
Coding sequences 4813
Coding density (%) 87.13
Average gene length (bp) 988
Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 17
Max spacer hisKA - HATPase domains 81
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
64 12 7 1 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (58 + 9) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 37
Histidine Kinase, Hybrid 15
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 9
P2CS Predicted Response Regulators (56) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family AmiR_NasR Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family AmiR_NasR Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 19CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 8
NtrC 5OmpR 11PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 1RpfG 2RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 1
Hpt 2

Locations of visitors to this page
Date : 27 April 2024, 23:07:06 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales