CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Rhodopseudomonas palustris BisB18
 

Rhodopseudomonas palustris BisB18

Genome
 

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Total size (bp) 5513844
G + C content (%) 64.95
Coding sequences 4886
Coding density (%) 85.55
Average gene length (bp) 965
Histidine domain Logo
Mean spacer hisKA - HATPase domains 36
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 70
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
75 20 4 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (70 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 42
Histidine Kinase, Hybrid 19
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (57) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family YesN Family CheB Family AmiR_NasR Family PleD Family VieA Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family YesN Family CheB Family AmiR_NasR Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 15CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 5
NtrC 6OmpR 19PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 1RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 2
misPredicted TCS proteins (3)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 2
Phosphotransfer Proteins(4)
HisKa 2
Hpt 2

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Date : 27 April 2024, 19:55:21 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales