CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Ramlibacter tataouinensis TTB310
 

Ramlibacter tataouinensis TTB310

Genome
 

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Total size (bp) 4070193
G + C content (%) 69.99
Coding sequences 3880
Coding density (%) 92.41
Average gene length (bp) 969
Histidine domain Logo
Mean spacer hisKA - HATPase domains 45
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 127
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
66 27 2 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (82 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 36
Histidine Kinase, Hybrid 39
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (47) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 16CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 8
NtrC 5OmpR 10PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 1RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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Date : 28 April 2024, 1:15:22 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales