CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Ralstonia solanacearum CMR15
 

Ralstonia solanacearum CMR15

Genome
 

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Total size (bp) 3596030
G + C content (%) 66.81
Coding sequences 3381
Coding density (%) 88.15
Average gene length (bp) 938
Histidine domain Logo
Mean spacer hisKA - HATPase domains 47
Min spacer hisKA - HATPase domains 40
Max spacer hisKA - HATPase domains 132
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
23 18 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (54 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 46
Histidine Kinase, Hybrid 6
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (70) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family VieA Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 8CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 18
NtrC 6OmpR 28PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 4RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 27 April 2024, 23:01:21 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales