CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Pseudogulbenkiania sp. NH8B
 

Pseudogulbenkiania sp. NH8B

Genome
 

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Total size (bp) 4332995
G + C content (%) 64.36
Coding sequences 4012
Coding density (%) 87.76
Average gene length (bp) 948
Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 55
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
29 21 2 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (37 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 28
Histidine Kinase, Hybrid 5
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (47) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 0CheV 2CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 7
NtrC 4OmpR 13PglZ 0PilB 0PleD 1
PleD_VieA 3PrrA 3RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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Date : 27 April 2024, 21:18:48 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales