CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Pseudomonas fulva 12-X
 

Pseudomonas fulva 12-X

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 4920769
G + C content (%) 63.52
Coding sequences 4461
Coding density (%) 88.76
Average gene length (bp) 979
Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 36
Max spacer hisKA - HATPase domains 124
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
59 30 2 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (65 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 38
Histidine Kinase, Hybrid 22
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (66) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 3
CheC 0CheV 3CheY 12CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 10
NtrC 6OmpR 16PglZ 0PilB 0PleD 5
PleD_VieA 2PrrA 3RpfG 1RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

Locations of visitors to this page
Date : 27 April 2024, 19:02:51 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales