CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Pseudonocardia dioxanivorans CB1190
 

Pseudonocardia dioxanivorans CB1190

Genome
 

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Total size (bp) 7096571
G + C content (%) 73.31
Coding sequences 6495
Coding density (%) 88.56
Average gene length (bp) 968
Histidine domain Logo
Mean spacer hisKA - HATPase domains 35
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 61
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
35 36 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (54 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 51
Histidine Kinase, Hybrid 2
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (54) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family RsbU Family AmiR_NasR Family CheY Family TrxB Family unclassified Family OmpR Family NarL Family LytTR Family RsbU Family AmiR_NasR Family CheY Family TrxB Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 26
NtrC 0OmpR 19PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 2
Hpt 0

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Date : 27 April 2024, 22:21:56 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales