CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Pseudomonas aeruginosa PA7
 

Pseudomonas aeruginosa PA7

Genome
 

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Total size (bp) 6588339
G + C content (%) 66.45
Coding sequences 6286
Coding density (%) 89.59
Average gene length (bp) 939
Histidine domain Logo
Mean spacer hisKA - HATPase domains 45
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 134
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
57 43 2 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (68 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 43
Histidine Kinase, Hybrid 15
Histidine Kinase, Unorthodox 6
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (79) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 4
CheC 0CheV 1CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 17
NtrC 6OmpR 25PglZ 0PilB 0PleD 3
PleD_VieA 1PrrA 3RpfG 3RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 3VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (3)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 2
Phosphotransfer Proteins(6)
HisKa 3
Hpt 3

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Date : 27 April 2024, 15:47:53 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales