CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Polaromonas sp. JS666
 

Polaromonas sp. JS666

Genome
 

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Total size (bp) 5200264
G + C content (%) 62.47
Coding sequences 4817
Coding density (%) 87.94
Average gene length (bp) 949
Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 127
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
38 30 3 2 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (57 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 42
Histidine Kinase, Hybrid 12
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (62) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RsbU Family AmiR_NasR Family VieA Family CheY Family MerR Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RsbU Family AmiR_NasR Family VieA Family CheY Family MerR Family unclassified Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 17CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 1NarL 14
NtrC 3OmpR 13PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 1RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 6
misPredicted TCS proteins (3)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 2
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 27 April 2024, 16:16:14 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales