CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Phenylobacterium zucineum HLK1
 

Phenylobacterium zucineum HLK1

Genome
 

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Total size (bp) 3996255
G + C content (%) 71.35
Coding sequences 3529
Coding density (%) 89.32
Average gene length (bp) 1011
Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 21
Max spacer hisKA - HATPase domains 50
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
59 10 2 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (46 + 6) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 21
Histidine Kinase, Hybrid 22
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 6
P2CS Predicted Response Regulators (45) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family AmiR_NasR Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 12CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 3
NtrC 4OmpR 10PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 1RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 10
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 2
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 0
Hpt 2

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Date : 27 April 2024, 17:09:13 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales