CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Pelotomaculum thermopropionicum SI
 

Pelotomaculum thermopropionicum SI

Genome
 

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Total size (bp) 3025375
G + C content (%) 52.96
Coding sequences 2919
Coding density (%) 86.39
Average gene length (bp) 895
Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 17
Max spacer hisKA - HATPase domains 52
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
22 13 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (20 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (25) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family CheB Family AmiR_NasR Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family CheB Family AmiR_NasR Family CheY Family unclassified Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 2
NtrC 4OmpR 9PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 0
Hpt 3

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Date : 27 April 2024, 17:09:19 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales