CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Paracoccus denitrificans PD1222
 

Paracoccus denitrificans PD1222

Genome
 

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Total size (bp) 2852282
G + C content (%) 66.71
Coding sequences 2799
Coding density (%) 90.49
Average gene length (bp) 922
Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 30
Max spacer hisKA - HATPase domains 54
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
16 8 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (15 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 11
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (16) - Phylogenetic Tree - Data Heatmap
PrrA Family OmpR Family NarL Family RsbU Family CheY Family unclassified Family PrrA Family OmpR Family NarL Family RsbU Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 1CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 3
NtrC 0OmpR 8PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 1RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 25 April 2024, 21:22:45 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales