CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Oscillatoria nigro-viridis PCC 7112
 

Oscillatoria nigro-viridis PCC 7112

Genome
 

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Total size (bp) 7479014
G + C content (%) 45.87
Coding sequences 5781
Coding density (%) 77.73
Average gene length (bp) 1006
Histidine domain Logo
Mean spacer hisKA - HATPase domains 46
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 168
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
196 19 8 1 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (186 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 105
Histidine Kinase, Hybrid 74
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (79) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CyC-C Family CheB Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family OmpR Family NarL Family CyC-C Family CheB Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 22CitT 0CsrA 0
CyC-C 8FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 13
NtrC 0OmpR 14PglZ 0PilB 0PleD 4
PleD_VieA 4PrrA 0RpfG 0RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 9
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 0
Hpt 2

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Date : 27 April 2024, 22:07:11 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales