CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database
 

Oalgarvensis Delta4

Metagenome
 
Total size (bp) 6382161
G + C content (%) 26.29
Coding sequences
Coding density (%) 0
Average gene length (bp) 0

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 67
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (48 + 6)
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 22
Histidine Kinase, Hybrid 25
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 6
P2CS Predicted Response Regulators (39)
NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family LytTR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 15CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 1
NtrC 5OmpR 4PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 11
misPredicted TCS proteins (8)
misPredicted Histidine Kinase 4
misPredicted Response Regulator 3
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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