CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Novosphingobium aromaticivorans DSM 12444
 

Novosphingobium aromaticivorans DSM 12444

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 3561584
G + C content (%) 65.15
Coding sequences 3324
Coding density (%) 91.63
Average gene length (bp) 982
Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 53
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
29 16 1 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (27 + 3) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 23
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 3
P2CS Predicted Response Regulators (36) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family AmiR_NasR Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family AmiR_NasR Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 8
NtrC 4OmpR 12PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(4)
HisKa 4
Hpt 0

Locations of visitors to this page
Date : 27 April 2024, 19:55:03 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales