CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Nostoc sp. PCC 7120 (Anabaena sp. PCC 7120)
 

Nostoc sp. PCC 7120 (Anabaena sp. PCC 7120)

Genome
 

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Total size (bp) 6413771
G + C content (%) 41.35
Coding sequences 5365
Coding density (%) 82.57
Average gene length (bp) 987
Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 144
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
145 17 7 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (129 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 75
Histidine Kinase, Hybrid 47
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (73) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family YesN Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family OmpR Family NarL Family YesN Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 24CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 12
NtrC 0OmpR 15PglZ 0PilB 0PleD 3
PleD_VieA 1PrrA 0RpfG 1RsbU 4Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 10
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 2
Hpt 0

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Date : 28 April 2024, 1:19:59 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales