CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Nostoc punctiforme PCC 73102 (Nostoc punctiforme ATCC 29133)
 

Nostoc punctiforme PCC 73102 (Nostoc punctiforme ATCC 29133)

Genome
 

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Total size (bp) 8234322
G + C content (%) 41.42
Coding sequences 6086
Coding density (%) 77.21
Average gene length (bp) 1045

Histidine domain Logo
Mean spacer hisKA - HATPase domains 46
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 157
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
171 21 7 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (147 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 80
Histidine Kinase, Hybrid 59
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (92) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family YesN Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family TrxB Family unclassified Family OmpR Family NarL Family YesN Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family TrxB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 28CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 15
NtrC 0OmpR 21PglZ 0PilB 0PleD 3
PleD_VieA 3PrrA 0RpfG 1RsbU 3Sarp 0
Spo0A 0TrxB 1VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 4unclassified 11
misPredicted TCS proteins (6)
misPredicted Histidine Kinase 2
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 3
Phosphotransfer Proteins(3)
HisKa 2
Hpt 1

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