CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Nitrosococcus watsonii C-113
 

Nitrosococcus watsonii C-113

Genome
 

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Total size (bp) 3328570
G + C content (%) 50.11
Coding sequences 2860
Coding density (%) 84.18
Average gene length (bp) 980
Histidine domain Logo
Mean spacer hisKA - HATPase domains 45
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 133
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
18 7 3 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (17 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 12
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (24) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family RpfG Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family RpfG Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 7
NtrC 4OmpR 2PglZ 0PilB 0PleD 1
PleD_VieA 2PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 25 April 2024, 13:02:04 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales