CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Nakamurella multipartita DSM 44233
 

Nakamurella multipartita DSM 44233

Genome
 

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Total size (bp) 6060298
G + C content (%) 70.92
Coding sequences 5240
Coding density (%) 87.15
Average gene length (bp) 1008
Histidine domain Logo
Mean spacer hisKA - HATPase domains 45
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 290
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
29 33 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (42 + 0) - Phylogenetic Tree - Data Heatmap
Classic Classic
Histidine Kinase, Classic 42
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (55) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family AmiR_NasR Family CitT Family CheY Family TrxB Family unclassified Family OmpR Family NarL Family LytTR Family AmiR_NasR Family CitT Family CheY Family TrxB Family unclassified Family
AlpA 0AmiR_NasR 3ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 4CitT 1CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 30
NtrC 0OmpR 13PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (4)
misPredicted Histidine Kinase 3
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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Date : 27 April 2024, 18:02:25 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales