CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Myxococcus stipitatus DSM 14675
 

Myxococcus stipitatus DSM 14675

Genome
 

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Total size (bp) 10350586
G + C content (%) 69.2
Coding sequences 8043
Coding density (%) 91.4
Average gene length (bp) 1176
Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 7
Max spacer hisKA - HATPase domains 151
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
174 53 4 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (152 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 112
Histidine Kinase, Hybrid 32
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 7
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (140) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family PleD Family CheY Family FrzZ Family MerR Family Xre Family TrxB Family VieB Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family PleD Family CheY Family FrzZ Family MerR Family Xre Family TrxB Family VieB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 4
CheC 0CheV 1CheY 39CitT 0CsrA 0
CyC-C 2FrzZ 3HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 12MerR 1NarL 5
NtrC 26OmpR 13PglZ 0PilB 0PleD 8
PleD_VieA 0PrrA 2RpfG 3RsbU 0Sarp 0
Spo0A 0TrxB 1VieA 0VieB 1WcaA 0
Xre 1YcbB 0YesN 0unclassified 18
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 3
Hpt 0

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Date : 27 April 2024, 21:43:11 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales