CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Myxococcus fulvus HW-1
 

Myxococcus fulvus HW-1

Genome
 

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Total size (bp) 9003593
G + C content (%) 70.62
Coding sequences 7284
Coding density (%) 88.07
Average gene length (bp) 1089
Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 99
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
181 33 9 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (143 + 3) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 91
Histidine Kinase, Hybrid 42
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 9
Possible incomplete Histidine Kinase 3
P2CS Predicted Response Regulators (135) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family PleD Family CheY Family FrzZ Family MerR Family Xre Family VieB Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family PleD Family CheY Family FrzZ Family MerR Family Xre Family VieB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 4
CheC 0CheV 1CheY 46CitT 0CsrA 0
CyC-C 2FrzZ 3HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 1NarL 4
NtrC 25OmpR 10PglZ 0PilB 0PleD 8
PleD_VieA 0PrrA 2RpfG 3RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 1WcaA 0
Xre 1YcbB 0YesN 0unclassified 22
misPredicted TCS proteins (4)
misPredicted Histidine Kinase 2
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 3
Hpt 0

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Date : 27 April 2024, 23:10:33 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales