CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Mycobacterium liflandii 128FXT
 

Mycobacterium liflandii 128FXT

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 6208955
G + C content (%) 65.61
Coding sequences 4994
Coding density (%) 79.48
Average gene length (bp) 988

Histidine domain Logo
Mean spacer hisKA - HATPase domains 32
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 50
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
8 11 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (16 + 0) - Phylogenetic Tree - Data Heatmap
Classic Classic
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (17) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CyC-C Family RsbU Family AmiR_NasR Family CheY Family OmpR Family NarL Family CyC-C Family RsbU Family AmiR_NasR Family CheY Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 1CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 5
NtrC 0OmpR 8PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

Locations of visitors to this page