CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database
 

Mouse Gut Community lean2

Metagenome
 
Total size (bp) 2133081
G + C content (%) 52
Coding sequences
Coding density (%) 0
Average gene length (bp) 0
Mean spacer hisKA - HATPase domains 30
Min spacer hisKA - HATPase domains 60
Max spacer hisKA - HATPase domains 60
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (2 + 1)
Classic Classic
Histidine Kinase, Classic 2
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (13)
OmpR Family LytTR Family PleD Family CheY Family unclassified Family OmpR Family LytTR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 3MerR 0NarL 0
NtrC 0OmpR 1PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (6)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 5
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(4)
HisKa 4
Hpt 0

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