CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Micromonospora sp. L5
 

Micromonospora sp. L5

Genome
 

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Total size (bp) 6962533
G + C content (%) 72.83
Coding sequences 6150
Coding density (%) 89.76
Average gene length (bp) 1016
Histidine domain Logo
Mean spacer hisKA - HATPase domains 33
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 65
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
29 35 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (52 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 49
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (49) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family RsbU Family AmiR_NasR Family PleD Family CheY Family unclassified Family OmpR Family NarL Family LytTR Family RsbU Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 23
NtrC 0OmpR 15PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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Date : 27 April 2024, 23:55:26 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales