CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Microcoleus sp. PCC 7113
 

Microcoleus sp. PCC 7113

Genome
 

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Total size (bp) 7470429
G + C content (%) 46.22
Coding sequences 6027
Coding density (%) 81.78
Average gene length (bp) 1014
Histidine domain Logo
Mean spacer hisKA - HATPase domains 57
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 169
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
195 18 11 6 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (173 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 90
Histidine Kinase, Hybrid 69
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 9
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (118) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CyC-C Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family FrzZ Family unclassified Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 48CitT 0CsrA 0
CyC-C 8FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 12
NtrC 0OmpR 19PglZ 0PilB 0PleD 2
PleD_VieA 2PrrA 0RpfG 1RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 20
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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Date : 27 April 2024, 17:42:36 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales