CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Methylobacterium sp. 4-46
 

Methylobacterium sp. 4-46

Genome
 

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Total size (bp) 7659055
G + C content (%) 71.58
Coding sequences 6609
Coding density (%) 81.53
Average gene length (bp) 945
Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 19
Max spacer hisKA - HATPase domains 89
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
104 27 6 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (88 + 16) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 42
Histidine Kinase, Hybrid 39
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 16
P2CS Predicted Response Regulators (86) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family AmiR_NasR Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 32CitT 0CsrA 0
CyC-C 3FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 12
NtrC 6OmpR 16PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 1RpfG 3RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 7
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(4)
HisKa 2
Hpt 2

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Date : 28 April 2024, 1:36:22 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales