CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Methylophaga sp. JAM7
 

Methylophaga sp. JAM7

Genome
 

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Total size (bp) 2697465
G + C content (%) 47.8
Coding sequences 2635
Coding density (%) 91.79
Average gene length (bp) 940
Histidine domain Logo
Mean spacer hisKA - HATPase domains 46
Min spacer hisKA - HATPase domains 40
Max spacer hisKA - HATPase domains 133
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
19 20 1 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (31 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 22
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (35) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family FrzZ Family MerR Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family FrzZ Family MerR Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 1CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 1NarL 9
NtrC 3OmpR 8PglZ 0PilB 0PleD 1
PleD_VieA 2PrrA 1RpfG 2RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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Date : 27 April 2024, 15:47:29 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales