CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Methylobacterium radiotolerans JCM 2831
 

Methylobacterium radiotolerans JCM 2831

Genome
 

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Total size (bp) 6077833
G + C content (%) 71.5
Coding sequences 5686
Coding density (%) 86.33
Average gene length (bp) 923
Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 23
Max spacer hisKA - HATPase domains 68
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
97 27 7 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (85 + 12) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 47
Histidine Kinase, Hybrid 31
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 12
P2CS Predicted Response Regulators (87) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family AmiR_NasR Family PleD Family CheY Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family AmiR_NasR Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 26CitT 0CsrA 0
CyC-C 2FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 13
NtrC 5OmpR 19PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 2RpfG 3RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 9
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(6)
HisKa 4
Hpt 2

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Date : 28 April 2024, 1:37:01 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales